Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVVKFGGSSLASSQQLYKVLNIIKSDYTRRFVVVSAPGKRYEEDLKMTDALIQYYQNYINGKDIVKDQTWIINRYQEIISDLSLGSTIAEEITRSIEQLASLPIENNQFLYDCFLAAGEDNNAKLVATFFNQNDIPARYVHPNEAGIIVTKEPCNARIIPGSYDKIENLCLYNEVLVIPGFFGVTEDNQICTFSRGGSDITGSLIAAGIKADLYENFTDVDGIFAAHPGVVKNPHAIPELTYKEMRELAYAGFSVLHDEALLPAYRDRIPLVIKNTNNPQQPGTKIVLK--HTRSNI------AVTGIASDSRFASINVSKYLMNREVG--FGRKVLQILEDLNISFEHMPTG-IDDLSIVL------REKELTPIKEQEILNYLTRKLEVDYVDIQHNLSTIVIVGENMKSQIGVTATATQALSREKINITMISQGSSEVSIMFVINSKDEKRAIKALYETFFQK |
| 3L76 Chain:A ((66-416)) | ---------------------------------------------------------------------------------------------------------------MDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTE-------ILEIRPDRLEHHLREGKVVVVAGFQGI--HLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWS-DEPGTKVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEII-VEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TSEVKVSCVIDQRDADRAIAALSNAFGVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154681 for 2423 contacts (-63.8/contact) +
2D Compatibility (PS) -34230 + (NN) -5611 + (LL) 8800
1D Compatibility (HY) -20400 + (ID) 5000
Total energy: -211122.0 ( -87.13 by residue)
QMean score : 0.367
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