Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIWSHLFAIVSILGIWYYHVKIDHLMVILLASVLSLEMGFIAYYSRNIFIRLLASLGLLFFYPQSLGIFLSLVSLEWSTKDIWQSNHFMQYMAYLLAILFIISSALLSLKLLVNAYDISKRYQLATVIPVMLFSSFAFCLEKSGSLGLEGIILNPSAFFNGIQTNMANLDFKALSCLFLVQLLLWGILMED |
| 2FYU Chain:K ((24-48)) | ---------WGAVGAVGLVWATD------WRLILDWVPYINGKFK----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11868 for 104 contacts (-114.1/contact) +
2D Compatibility (PS) -2420 + (NN) 711 + (LL) 15064
1D Compatibility (HY) -2800 + (ID) 150
Total energy: -1463.0 ( -14.07 by residue)
QMean score : 0.114
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