Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSKATFHIGTIIKTHYLFNFFRKQGIVAMTQEEIDQMIEDWISNGFP-DELKRLIPDEE
3LLR Chain:A ((130-152))
----------------------------------NKPMI-EWALGGFQPSGPKGLEPP--
General information:
TITO was launched using:
RESULT:
Template:
3LLR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5266 for 78 contacts (-67.5/contact) +
2D Compatibility (PS) -2345 + (NN) -1667 + (LL) 3232
1D Compatibility (HY) -400 + (ID) 400
Total energy: -6846.0 ( -87.77 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3LLR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LLR-query.scw
PDB file :
Tito_Scwrl_3LLR.pdb
: