Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYVIFSFEEGDYLCDNKD----------KLLIFESRGLAYQYMQKHYLKPIPLQKTKRIMYPMSYYQAPFKVQQVC
2H0E Chain:A ((68-110))
------EFHAGDYFASK--NAADQPFLTIVTVRFQLAD-----PDAHYHIPLLLSPFGYQVYRGS------------
General information:
TITO was launched using:
RESULT:
Template:
2H0E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -728 for 101 contacts (-7.2/contact) +
2D Compatibility (PS) -3226 + (NN) 1579 + (LL) 2540
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -1485.0 ( -14.70 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_2H0E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H0E-query.scw
PDB file :
Tito_Scwrl_2H0E.pdb
: