Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDMIKRWIEKIKSSAIAKPFVVTKKWFQDNVIKRKLVVFSVLFVAWISLLLGAIYSPQRQTYTDEQLKTKQAFENGTGEMRLSSQTYSPETGIIILQFETKDSTSPVDRGIDTKRLKWNLYAKKKTSQTTMEIIPIVDNKISIIIRNVPEDFGAYAIDITNKTISSSSIDIDVSNPSEEQEKPSKTKDNNTDNVIQFYVTTQSSQLKT--GSLKKVSREEFALSEINEEKDFQTGQIKKLSRSIKQLKTSIEDDESRKSGLLKEAEYLSGEDLESNQKDIATIESNIETKNRSIETATQNIEKVQAKIASLEKKATAIKDGTFEFSNPIETVEMK |
2POH Chain:A ((33-142)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYVIAQGTDVGAIAGKANEAGQGAYDAQVKNDEQDVE---LADHEARIKQLRIDVDDHESRITANTKAITALNVR-VTTAEGEIASLQTNVSALDGRVTTAENNISALQADYVSKTATTSQSLASPLNVTTSYSVGGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24064 for 429 contacts (56.1/contact) +
2D Compatibility (PS) -11504 + (NN) -556 + (LL) 13880
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: 20134.0 ( 46.93 by residue)
QMean score : 0.410
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