Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQKNNRLGYFGRQKQAFDDYVFLTKAKMKAERDYFASEGESDPERLAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
3NDB Chain:A ((16-43))--------------------------------------EGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPRQHWEICG


General information:
TITO was launched using:
RESULT:

Template: 3NDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4456 for 96 contacts (46.4/contact) +
2D Compatibility (PS) -2940 + (NN) -3298 + (LL) 2688
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -1294.0 ( -13.48 by residue)
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_3NDB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NDB-query.scw
PDB file : Tito_Scwrl_3NDB.pdb: