Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTISSAEWEIMRVVWAQQNTTSNEILAVLLEKYDWTPSTVKTLLRRLLDKGYVSREKMGKGFSYSPLIDEDLAMMSEVDSVFQKVCQTKHVAIVRHLLESIPMTEKDRLNLQSSLEAKKGKTLERVACNCIPGQCQCH
1P6R Chain:A ((7-74))
--ISDAELEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHKEGRVFVYTPNIDESDYIEVKS------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42036 for 449 contacts (-93.6/contact) +
2D Compatibility (PS) -7258 + (NN) -3246 + (LL) 5520
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -54020.0 ( -120.31 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1P6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P6R-query.scw
PDB file :
Tito_Scwrl_1P6R.pdb
: