Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELPKTSQPPVGVFAEIYEKLMNEGAEHIIAIHLTHTLSGTIEASR----QGANIAGADVTVIDSTFTDQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLLSSLLNIKVIMELTNH-ELVPIVKGRGLKTFSKWLDNFVESAQTRKIAEIGISYCGKADMANNFKEKLAVLGAP--ISVLETGSIIQTHTGEDAFAVMVRYE |
3LUP Chain:A ((5-278)) | --KLALITDTSAYLPEAIENHEDVYVLDIPIIIDGKTYIEGQNLTLDQYYDKLAASKELPKTSQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEHPNLT---IAFPDTKITSAPQGNLVRNALMCSREGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIVVYEKVRTEKKALKRLAEIVKEMTADGEYDIAIIHSRAQDKAEQLYNLLAKAGLKDDLEIVSFGGVIATHLGEGAVAFGITPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132939 for 2147 contacts (-61.9/contact) +
2D Compatibility (PS) -29211 + (NN) -12699 + (LL) 76
1D Compatibility (HY) -17200 + (ID) 3750
Total energy: -195723.0 ( -91.16 by residue)
QMean score : 0.527
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