Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFFPNIDNIIKNYIKEMITHSDIPDLQKQLETAYQVPYSFALGIYISTIESIILNWIDHDFTEEPEEIARYITSVVRI
3JAZ Chain:A ((678-720))
-----------------------------LKTASQNPYSYETYIYITPIAAA----VRFPFYSNSAMINRYMTAVADD
General information:
TITO was launched using:
RESULT:
Template:
3JAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -913 for 164 contacts (-5.6/contact) +
2D Compatibility (PS) -4533 + (NN) -2469 + (LL) 2484
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -9481.0 ( -57.81 by residue)
QMean score : -0.008
(partial model without unconserved sides chains):
PDB file :
Tito_3JAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JAZ-query.scw
PDB file :
Tito_Scwrl_3JAZ.pdb
: