Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAP-KLVPLLRKGDSVAVNGVCLTVLDKSETAFIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKI--QKDDIAVRFSIDAPPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
1I8D Chain:A ((1-185))
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQ-DSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM------------
General information:
TITO was launched using:
RESULT:
Template:
1I8D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104231 for 1429 contacts (-72.9/contact) +
2D Compatibility (PS) -19175 + (NN) 1902 + (LL) 1120
1D Compatibility (HY) -15200 + (ID) 3150
Total energy: -138734.0 ( -97.08 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_1I8D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I8D-query.scw
PDB file :
Tito_Scwrl_1I8D.pdb
: