Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMS-AINQAYIRFRHYSDIGFPRVMAGEWTTEYFRFWRCKETLLEFGYREIDEATGIYFQEIYEHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
| 4YGS Chain:A ((1-189)) | -MKAVLFDIDGTILTEEPLIMLFLPQVYDKLSRKLGISKDEARERFLSEI-LGRRDSYDWHDWNFFF---KLFDLDLKYEEL--------LERYPHKLQ---VYPDTIPTLEWLRDTGYKLGIVTSGP-KYQRLKLKLTGLLDYFDV--VITRDDVNAIKPEPKIFLYTIERLGVEPGEAVMVGDSLSQDVYGAKSVGMTAVWINRNGDRGYNMADYEIRTLYELRKILGGERV------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70343 for 1509 contacts (-46.6/contact) +
2D Compatibility (PS) -20427 + (NN) -8189 + (LL) 5240
1D Compatibility (HY) -16400 + (ID) 2900
Total energy: -113019.0 ( -74.90 by residue)
QMean score : 0.293
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