Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNYRKLIVLLLLTFFVIFMGAYAYTHIVEKRSLTSNTIEKTLPVVNQIKPQTIKEYQNYLTKVAKRNVLPVDIPQALNNEKVEITATDGMQTFTWNDKNNPKQKVIFYVHGGSYIHQASELQYIFVNKLAKKLDAKVVFPIYPKAPTYNYSDAIPKIKKLYQNTLASVTSPKQIILVGESAGGGLALGLADNLVTEHIKQPKEIILISPWLDIATNNPKIEKVQKKDPLLKAWQLQQVAPYWANGKKNFKNPQVSPLYSSQFNKMAPISFFIGTHDIFYPDNQLLHQKLAKENIKHHYIVGQKMNHVY----PVLPIPEAETAFKQMLKIINH
3G9Z Chain:A ((68-278))--------------------------------------------------------------------------------------------------------KAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARYLNG-ADAKHPYASPNFAN-LKGLPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQW


General information:
TITO was launched using:
RESULT:

Template: 3G9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108772 for 1823 contacts (-59.7/contact) +
2D Compatibility (PS) -21726 + (NN) -11677 + (LL) 8524
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -145101.0 ( -79.59 by residue)
QMean score : 0.576

(partial model without unconserved sides chains):
PDB file : Tito_3G9Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G9Z-query.scw
PDB file : Tito_Scwrl_3G9Z.pdb: