Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLLVDGKWVDQWYDTASTGGKFVRTVTQFRHWVTKDGSAGPSGDAGFKAESGRYHLYVSLACPWASRVLIMRKLKNLESHISISIVNPLMLENGWTF---QEYKGVIPDMINQSQYLYQIYQASQSDYTGRVTVPVLWDKKCHTIVNNESSEIMRMLNTAFNHITGNTD---DYYPDSLQGQIDEMNNFIYPKINNGVYKAGFATSQNVYQKEVETLFTALDQLEKHLSDNHYLVGEQFTEADIRLFTTLVRFDTVYYGHFKCNLKALHD-YPHLWHYTKRIY-NLPGIAETVNFDHIKKHYYGSHKTINPTGIIPAGPNLDWTI |
| 3PPU Chain:A ((52-346)) | --------------------GSFKRKAASFRNWIQ------PNGD--FTPEKGRYHLYVSYACPWATRTLIVRKLKGLEDFIGVTVVSPRMGSNGWPFANVDPFPAADSDPLNNAQHVKDLYLKVKPDYDGRFTVPVLWDKHTGTIVNNESSEIIRMFNTAFNHLLPEDKAKLDLYPESLRAKIDEVNDWVYDTVNNGVYKSGFASTQKAYEAAVIPLFESLDRLEKMLEGQDYLIGGQLTEADIRLFVTIVRFDPVYVTHFKCNLRTIRDGYPNLHRWMRKLYWGNPAFKDTCNFEHIKTHYFWSHTFINPHRIVPIGPIPDILP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190766 for 2376 contacts (-80.3/contact) +
2D Compatibility (PS) -30629 + (NN) -12759 + (LL) 740
1D Compatibility (HY) -31200 + (ID) 7700
Total energy: -272314.0 ( -114.61 by residue)
QMean score : 0.536
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