Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQSAVGHTD-ILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVTGLKEMLWSVDTEDWKNHNT-QAMMTNIKKQLRPGGVILMHDI----HQTSIDALPTIMDYLITQGYYFVTVGELYSTP |
2C71 Chain:A ((7-190)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VALTFDDGPDNVLTARVLDKLDKYNVKATFMVVGQRVNDSTAAIIRRMVNSGHEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLETSPTLFNNVDLV-FVGGLTANDWIPSTTAEQRAAAVINGVRDGTIILLHDVQPEPHPTP-EALDIIIPTLKSRGYEFVTLTELFTLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72966 for 1485 contacts (-49.1/contact) +
2D Compatibility (PS) -19383 + (NN) -11851 + (LL) 18700
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -102550.0 ( -69.06 by residue)
QMean score : 0.526
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