Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKYIVNTSNDPAYNVALEAYAFQKLTDIDEIFILWINEPAIIIGRHQNTIQEINKEFIDKNGIHVVRRLSGGGAVYHDLNNLNYTIISNNTQEGAFDFQTFSKPVIDTLAKLGVKAEFTGRNDLEI----NGQKFAGNAQAYYKGRMMHHGCLLFDVDMSVLGQALKVSKDKIESKGIKSVRARVTNIVDHLSDKITVQEFSDAILAQMKEEYPE-MDEYVLSDAELSEIQAMRDN--QFATWDWTYGKAPEYTIERGVRYPAGKITTYANVENSTIKSVKIFGDFFGVKPVDDIEKMLEGVRYDYKDVLAALKTVDTSQYFSRMTPEEITKAIVD
4TVW Chain:A ((7-306))LRLLISDSYDPWFNLAVAECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPE---YDKTISTSIVLNALNALGVSAEASGRNDLVVKTVEGDRKVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG-ITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAG


General information:
TITO was launched using:
RESULT:

Template: 4TVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133158 for 2338 contacts (-57.0/contact) +
2D Compatibility (PS) -31056 + (NN) -7240 + (LL) 140
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -194264.0 ( -83.09 by residue)
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_4TVW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TVW-query.scw
PDB file : Tito_Scwrl_4TVW.pdb: