Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAE-YRGMKCPRYDTLNPVDLET-PIYPEHNQDYLQECLWNLKAKGIDLPINKIK
1ERK Chain:A ((10-71))
------------------------------------------------------EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG
General information:
TITO was launched using:
RESULT:
Template:
1ERK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2576 for 321 contacts (-8.0/contact) +
2D Compatibility (PS) -6074 + (NN) 2689 + (LL) 4132
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -7229.0 ( -22.52 by residue)
QMean score : 0.081
(partial model without unconserved sides chains):
PDB file :
Tito_1ERK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ERK-query.scw
PDB file :
Tito_Scwrl_1ERK.pdb
: