Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKKIAGIGLASIAVLSLAACGHRGASKSGGKSDSLKVAMVTDTGGVDDKSFNQSGWEGMQAWGKKNGLKKGAGFDYFQSASESDYATNLDTAVSSGYKLIFGIGFSLHDAIDKAADNNKDVNYVIVDDVI---KGKDNVASVVFADNESAYLAGIAAAKTTKTKTVGFVGGMESEVITRFEKGFEAGVKSVDKSIKIKVDYAGSFGDAAKGKTIAAAQYASGADIVYQVAGGTGAGVFSEAKSRNESLKEADKVWVLGVDRDQAAEGKYTSKDGKASNFVLASSIKEVGKSVELIATKTSKGKFPGGNVTTYGLKDGGVDIATTNLSDDAVKAIKEAKAKIISGDIKVPSK |
4P98 Chain:A ((73-215)) | ----------------------------------------------------------------------------------------------ARGFDLVVGHGIDVSEPILRVATEFPDVHFSASGDATLAERLPPNVDGWTYDFGQLGYLDGFVAGSLRGVEKVGAVGGPQLPFVLATHKGIRAGLKAANPRASYEETYTGRFYDLQKEQEAARGLLDKGAQLLVATDDGRGLGQAAVAGDVPTIGVSAAAGADIKAVNITTALDLLPTYQSYLEQIRAGTFGRRFDVLALGNRGIVLTPITAVGDVVPDDLQARVDALSERLASGELRLPNFFE-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48170 for 1008 contacts (-47.8/contact) +
2D Compatibility (PS) -16061 + (NN) -10692 + (LL) 4940
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -76983.0 ( -76.37 by residue)
QMean score : 0.519
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