Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKKLLGLTTTVVISALILGACGQSKNEDAKVVRVGTMVKSKTEKARWDKIEELVKKK-GVKLKFTEFTDYTQPNKALESDEIDINAFQHYNYLNNWNKANKTNLVSVAETYFTSFRLYSGTKNGKGKYQTVSEIPNKATITIPNDAVNESRSLYLLQSAGLLKLKVSGDTLATMSDVVSNPKSLDLKEVDAAQTARSLDSTDA--AVINNDFVTEAGINP-KSAIFIEPKSKNAKQWYNLLVAQKGWQDKSKAKAIKEVVKAYHTDAVKKVIEKTSQGLDQPVW
4YAH Chain:X ((29-265))-----------------------------DPNHIKVGVIVGAEQQVAEV--AQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSK------KIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKE---SPYVNLIVTR---EDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW


General information:
TITO was launched using:
RESULT:

Template: 4YAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52287 for 1932 contacts (-27.1/contact) +
2D Compatibility (PS) -25084 + (NN) -10522 + (LL) 2332
1D Compatibility (HY) -19200 + (ID) 4400
Total energy: -109161.0 ( -56.50 by residue)
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4YAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YAH-query.scw
PDB file : Tito_Scwrl_4YAH.pdb: