Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRSKFDEELDKLHNQFYAMGIEAIGQIKKTVRAFVSHDRELAKEVIEDDVTLNNFETKLEKKSLEIIALQQPVSQDLRTVITVLKATSDVERMGDHAAAVAKATIRMKGEERIPAVELEINNMGKAVKNMLEEALTAYINGDDEKAYEVAAMDEIVDDYFRDIQKMVVETIQKHPDVAFAAKEYFQVLMHLERIGDYGKNICEWIVYLKTGKIIEL
1SUM Chain:B ((28-211))
----------------------------RNSISSLVERNESLAREVIADEEVVDQMEVEIQEKAMEVLGLFSPIGKPLLTVTAGIRVAELIENIADKCHDIAKNVLELMEEPPLKPLE-DIPAMANQTSEMLKFALRMFADVNVEKSFEVCRMDSKVDDLYEKVREELLLYMMESPKYVKRALLLLEIAGNIEIIADYATNIVEVSVYMVQGEAYKC
General information:
TITO was launched using:
RESULT:
Template:
1SUM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65851 for 1377 contacts (-47.8/contact) +
2D Compatibility (PS) -20225 + (NN) -16962 + (LL) 2596
1D Compatibility (HY) -16800 + (ID) 2400
Total energy: -119642.0 ( -86.89 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1SUM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUM-query.scw
PDB file :
Tito_Scwrl_1SUM.pdb
: