Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKRITLAVTGSISAYKAADLTSQLTKIGYDVHIIMTQAATEFITPLTLQVLSKNPIHLDVMDEHNPKIINHIELAKRTDLFIVAPASANTIAHLAYGFADNIVTSVALAMPDETPKLIAPAMNTKMYHNTITQRNIDILKKIGYQEIEPRISLLACGDTGQGALADISTILKCIQEVAN
1G5Q Chain:A ((1-135))
MYGKLLICATASINVININHYIVELKQHFDEVNILFSPSSKNFINTDVLKLFCDN-----LYDEIKDPLLNNINIVENHEYILVLPASANTINKIANGICDNLLTTVCLTGYQKL--FIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMNKSFEISSGRYKNNITMPNIENVLNFVL
General information:
TITO was launched using:
RESULT:
Template:
1G5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104607 for 1053 contacts (-99.3/contact) +
2D Compatibility (PS) -14057 + (NN) -299 + (LL) 132
1D Compatibility (HY) -14800 + (ID) 2100
Total energy: -135731.0 ( -128.90 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_1G5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G5Q-query.scw
PDB file :
Tito_Scwrl_1G5Q.pdb
: