Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDFYIKQIIIHQFSPNDTELVLSDTPLTL--TPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVISEDQKTNDLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAESVEFIQNPDGTYSILIKNIQDIQNK |
| 3UC9 Chain:A ((6-75)) | ---------------PQNKILVLSDHPHNFLKTQFLQDLFHCSSTGI---SIVKDQTWENRYYKVHF--DLYIDSCKDIPVWVEEFITPECEPLRNVMAGIILITDIRQTKPQELLHQFMIAAHRNTFVVLVNVNEEVEQDEIDELNEIWSNAFTNVIEFVNWKTVNHNDYGEKLGLDRIQEIIDTHDWLNCEVQP----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UC9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6505 for 355 contacts (-18.3/contact) +
2D Compatibility (PS) -7171 + (NN) -1018 + (LL) 11440
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -9154.0 ( -25.79 by residue)
QMean score : 0.280
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