Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPKTEKGNSLIVGYPQIGLSPFLFSHVSGHVLRLPENKSTEL-WEDCQILNKGHCVEMRK |
3M86 Chain:A ((27-44)) | ---------------------------------------------------------------------KIQLRTNPSTGYAWNIEYPTDTFSLSQDTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 911 for 44 contacts (20.7/contact) +
2D Compatibility (PS) -1545 + (NN) 1218 + (LL) 3532
1D Compatibility (HY) -800 + (ID) 250
Total energy: 3066.0 ( 69.68 by residue)
QMean score : 0.364
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