Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDF---IKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDSTNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKKGVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDFYIKEEENYFNYIGPQANIDHIQLQMPGHHQ-----VSNASIAITTSLLLRDKYPKLTL--QTIKDGLEMTKWVGRTELIF--PNVMIDGAHNNES----VDALVQVIKKYQQKNVHILFAAINTKPIESMLESLSS-IAPVSVTSFDYPKSIN---LDKYPKAYTRVSD----WKKWLHDINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 3QCZ Chain:A ((23-437)) | ------LEHLHS------ELGLERVKQVAERLDLLKPAPKIFTVAGTNGKGTTCCTLEAILLAAGLRVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQIEAGRGDISLTYF--------EFGTLSALQLF---KQAKLDVVILEVGLGGRLDATNIVDSDVAAITSIALDHTDWLGYDRESIGREKAGVFRGGKPAVVGEP--DMPQSIADVAAELGAQLYRRDVAWKFSQ------------NGWHWQC---GERQLTGLPVPNVPLANAATALAVLHYSELPLSDEAIRQGLQAASLPGRFQVVSEQPLLILDVAHNPHAARYLVNRLAQVI----QGKVRAVVGMLSDKDIAGTLACLSERVDEWYCAPLEGPRGASAGQLAEHLVSARQFSDVETAWRQAMQDAD---TQDVVIVCGSFHTVAHVMAALHL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211122 for 3148 contacts (-67.1/contact) +
2D Compatibility (PS) -40093 + (NN) -15048 + (LL) 3676
1D Compatibility (HY) -19600 + (ID) 5600
Total energy: -287787.0 ( -91.42 by residue)
QMean score : 0.486
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