Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVPATSANIGPGFDSIGVALSK-YLSIEVLE-ESTEWLVEHNLVNIPKDHTNLLIQTALHVKSDLAPHRLKMFSDIPLARGLGSSSSVIVAGIELA-----------------NQLGNLALSQKEKLEIATRLE------GHPDNVAPAIFGDLVISSIVKNDIKSLEVMFPDSSF----IAFIPNYELKTSDSRNVLPQKLSYEDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQPLVKEFGVIKQISTQNGAYATYLSGAGPTVMVLCSKEKEQPIVTELSKLCLDGQIQVLNIERKGVRVEKR |
| 1H72 Chain:C ((3-268)) | VRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDK-------NVAGIVAK---KMIDDFNIGKGVKIT---IKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVT----NYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKE-EVKDKVYGITISGSGPSIIAFPKEEFIDEVENILRDYYENTIRTEVGKGVEVV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77783 for 1823 contacts (-42.7/contact) +
2D Compatibility (PS) -25604 + (NN) -9135 + (LL) 2440
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -130332.0 ( -71.49 by residue)
QMean score : 0.320
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