Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
3H8K Chain:B ((584-596))
-------------------------------------QRKDELLQQARKR--------
General information:
TITO was launched using:
RESULT:
Template:
3H8K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2683 for 42 contacts (63.9/contact) +
2D Compatibility (PS) -1441 + (NN) -1144 + (LL) 4452
1D Compatibility (HY) -400 + (ID) 150
Total energy: 4000.0 ( 95.24 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3H8K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H8K-query.scw
PDB file :
Tito_Scwrl_3H8K.pdb
: