Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQLIALDMTDPLSTAIFAALDYLGKTSSKIAYH----------------------IESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIG-FSTVPMHL-----NAYLVIADTGIHGHTKEAVDKVKSSGEA----VLPFLKELGYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV |
| 4HAC Chain:B ((26-293)) | ---------APGKIYLFGEHAVVYGETAIA---------CAVELRTRVRA-ELNDSITIQ-----SQIGRTGLDFEKHPYVSAVIEKMRKSIPINGVFLTVDSDIPVGSGLGSSAAVTIASIGALNELFGFGLSLQEIAKLGHEIEIKVQGAASPTDT----------YVSTFGGVVTIPERRKLKTPDCGIVIGDTGVFSSTKELVANVRQLRESYPDLIEPLMTSIGKISRIGEQLVLSGDYASIGRLMNVNQGLLDALGVNILELSQLIYSARAAGAFGAKITGAGGGGCMVALTAPEKCNQVAEAVAGAGGKVTITKPTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107877 for 1920 contacts (-56.2/contact) +
2D Compatibility (PS) -25586 + (NN) -7143 + (LL) 2912
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -157344.0 ( -81.95 by residue)
QMean score : 0.397
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