Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSSIPQHKEDKVQLLFESYLLGMTNLSKDSSEFVSTIVMTH
2IXN Chain:A ((114-169))
------------------------------------------------------QLSIYLDESWGNKRRIDYGS--GHELNFMCLLYGLYSYGIFNLSNDSTNLVLKVFIEY
General information:
TITO was launched using:
RESULT:
Template:
2IXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1076 for 304 contacts (3.5/contact) +
2D Compatibility (PS) -5801 + (NN) 769 + (LL) 3556
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -6800.0 ( -22.37 by residue)
QMean score : 0.013
(partial model without unconserved sides chains):
PDB file :
Tito_2IXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IXN-query.scw
PDB file :
Tito_Scwrl_2IXN.pdb
: