Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFA-KGATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKVNHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHKRLLMENSNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSENVITE--SQAFSFHVKGK-LENTYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIAQTTVP-GRMEVLTQTNGAKIFVD-YAHNGDSLKKLL---AVVEEHQKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDPLVISQEIASHINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
| 2AM1 Chain:A ((22-355)) | -------------------------------EDTQLEKAEFDSRLIGTGDLFVPLKGARDGHDFIETAFENGAAVTLSEKEV-SNHPYILVDDVLTAFQ--SLASYYLEKTTVDVFAVTGSNGKTTTKDMLAHLLSTRYKTYKTQGNYNNEIGLPYTVLH--MPEGTEKLVLEMGQDHLGDIHLLSELARPKTAIVTLVGEAH-LAFFKDRSEIAKGKMQ---IADGMASGSLLLAPADPIV----EDYLPIDKKVVR------FGQGAELEITDLVERKDSLTFKANFLEQALDLPVTGKYNATNAMIASYVALQEGVSEEQIRLAFQHLELTRNRTEWKKAANGADILSDVYNANPTAMKLILETFSAIPANEGGKKIAVLADMKELGDQSVQLHNQMILSLSPDVLDIVIFYGEDIAQLAQLASQMFPIGHVYYFKKTEDQDQFEDLVKQVKESLGAHDQILLKGSNSMNLAKLVESLEN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125248 for 2591 contacts (-48.3/contact) +
2D Compatibility (PS) -33918 + (NN) -239 + (LL) 3548
1D Compatibility (HY) -12000 + (ID) 4250
Total energy: -172107.0 ( -66.42 by residue)
QMean score : 0.260
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