Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEIDYKKVTGMIHSTESFGSVDGPGIRFIIFMQGCKMRCQYCHNPDTWEME---TNNSKERTVEDVLKEALRYKHFWGKDGGITVSGGEAMLQIDFITALFIEAKKL-GI-HTTLDTCGFAYRATPEYHAILEKLLD-VTDLVLLDLKEIDPEQHKIVTR--QSNKNILQFARYLSDRGTPVWIRHVLVPGLTDIDDHLKRLGEFVQTLDNVDKFEVLPYHTMGEFKWRELGIPYPLAGVKPPTPERVKNAKDIMKTESYTEYLKRIQN
1TV8 Chain:A ((15-202))--------------------------DLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELG--VKKIRITGGEPLMRRDL-DVLIAKLNQIDGIEDIGLTTNGLLLKK------HGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKG--INDDQIIPMLEYFKDKH-IE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKD


General information:
TITO was launched using:
RESULT:

Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114348 for 1321 contacts (-86.6/contact) +
2D Compatibility (PS) -19653 + (NN) -11397 + (LL) 1600
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -155198.0 ( -117.49 by residue)
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_1TV8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TV8-query.scw
PDB file : Tito_Scwrl_1TV8.pdb: