Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKIILGILSLLSVVTLVACGSSDKQLQDKVEKKGKLVLAVSPDYAPFEFKALVNGKDKVVGADIELAQAIADELHVKLEVSPMSFDNVLSSLQTGKADMAISGLSYTKERAKVYDFSKPYYTTENAVLVRKSDLGKYTSIESLKGKKIAVQKGSIEEGVSKKSFKNSHVVSLTAMGEAISELKSGKVEAVDLEKPVAEGYLAQNPDLVLAKFALKTGEGDAKAVALPKDSGKMLKTVNKVIKRLEKEDKYKVYISDAAKLTGNQVE |
| 4PSH Chain:A ((3-221)) | -----------------------------DEIKSRGYLLVGLSADFPPFEF---VDENGNIVGFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAFSDPYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGD-IEVSKYDGIKVVRFDKFTDAFLELKRGRADAVVLDSATARAFVAKNPDLVISSGVLSS---EQYGIAVRKEDTDLLEFINSVLRELKKS-PYDVLIEKWFS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64232 for 1775 contacts (-36.2/contact) +
2D Compatibility (PS) -23796 + (NN) -6952 + (LL) 2948
1D Compatibility (HY) -24400 + (ID) 3950
Total energy: -120382.0 ( -67.82 by residue)
QMean score : 0.553
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