Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYKIIASLFLVLIPIFSQVLVKIFKLKKFNIMFPDVAFPIFVFLIPLISSSLLKQNLLPYYLILISLLAIGITIKLLRTKTLFSYKRFLKLFWRSGFILTFLFYLGLLVIIFIKVQ
1WAZ Chain:A ((43-59))
----------------------------------------------------------LDYVLLPALAIFIGLTI------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7921 for 61 contacts (-129.9/contact) +
2D Compatibility (PS) -1587 + (NN) 510 + (LL) 11020
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -728.0 ( -11.93 by residue)
QMean score : 0.235
(partial model without unconserved sides chains):
PDB file :
Tito_1WAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WAZ-query.scw
PDB file :
Tito_Scwrl_1WAZ.pdb
: