Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPS-DAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW |
3K2D Chain:A ((36-228)) | --------------------------------------------------------------VELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDDVALSIINTTYASSINLTPEKDGVFVE--DKESP-YVNLIVARQDNVQNEN---VQNFVKAYQTEEVYTAAKEIFK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43427 for 1494 contacts (-29.1/contact) +
2D Compatibility (PS) -19768 + (NN) -3847 + (LL) 5956
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -82036.0 ( -54.91 by residue)
QMean score : 0.363
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