Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQFLGEFLGTFILVLLGDGVVA--------------GNVLSKTKEEGTGWTAIVFGWGIACTVAVYVSGLFSPAHLNPAVTLAMASIGAISWGQVIPFIIAQMLGAMVAATILWLHYYPHWKETKDSGLILASFSTGPAIRHTPSNLLGEIIGTAILVITIMAIGPSKVA-AGLGPIIVGIVIFAVGFSLGPTTGYAINPARDLGPRLMHAILPIENKGDSDWSYAWIPVVGPIIGGVLGAILYNIALTLI
2EVU Chain:A ((7-241))
--RCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAF-GSFIFLQCAGIGAATVGG---LGATAPFPGISYWQA-MLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIF----AGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS--
General information:
TITO was launched using:
RESULT:
Template:
2EVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169098 for 2050 contacts (-82.5/contact) +
2D Compatibility (PS) -22405 + (NN) -2281 + (LL) 968
1D Compatibility (HY) -22400 + (ID) 4000
Total energy: -219216.0 ( -106.93 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_2EVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EVU-query.scw
PDB file :
Tito_Scwrl_2EVU.pdb
: