Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISEEEVRHVANLSKLRFSDQETKEFASSLSKIVDMIELLNEVDTEGVPVTTTMADRKTVMREDIAQPGNNRDDLFKNVPQHQDYYIKVPAILEDGGDA
3IP4 Chain:C ((3-94))
-KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTI-------
General information:
TITO was launched using:
RESULT:
Template:
3IP4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3480 for 386 contacts (-9.0/contact) +
2D Compatibility (PS) -9919 + (NN) -5531 + (LL) 136
1D Compatibility (HY) -3600 + (ID) 1850
Total energy: -24244.0 ( -62.81 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3IP4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IP4-query.scw
PDB file :
Tito_Scwrl_3IP4.pdb
: