Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKALISIDYTYDFVADDGKLTAGKPAQSIASAIADVTEKAYRSGDYIFFAIDNHDIGDVFHPETNLFPEHNIKGTSGRNLYGPLGTLYETIKEDSRVFWIDKRHYSAFSGTDLDIRLRERRIDTLILTGVLTDICVLHTAIDAYNLGYKIEVPAAAVASLNDSNHQWALNHFKTVLGATIL
3O93 Chain:A ((21-202))
MTKALISIDYTEDFVADSGKLTAGAPAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFHPESKLFPPHNLIGTSGRNLYGDLGIFYQEHGSDSRVFWMDKRHYSAFSGTDLDIRLRERRVSTVILTGVLTDI-VLHTAIDAYNLGYDIEIVKPAVASIWPENHQFALGHFKNTLGAKLV
General information:
TITO was launched using:
RESULT:
Template:
3O93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126524 for 1513 contacts (-83.6/contact) +
2D Compatibility (PS) -19275 + (NN) -4365 + (LL) 56
1D Compatibility (HY) -22000 + (ID) 6450
Total energy: -178558.0 ( -118.02 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3O93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O93-query.scw
PDB file :
Tito_Scwrl_3O93.pdb
: