Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNIGQTGIQATRIALGCMRMSD-----LEGKQAEEVVGTALDLGINFFDHADIYG-GGLSELRFRDAIKHLNVNRDKMIIQSKCGIREGYFDFSK-----EYILSSVDGILERLGTEYLDFLILHRPDVLVEPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYLDEPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLFVNHPDY-KELNETIAKLAKNYNVSSEAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDIALTREEWYDIYRSAGNILP |
| 3V0U Chain:A ((5-305)) | ---KLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLP--REKIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIR--RAHAVHPVTALQIEYS---------------LWTRDIE--DEIVPLCRQLGIGIVPYS-----------------NKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVKLTKEDLKEISDAVPANTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138345 for 2100 contacts (-65.9/contact) +
2D Compatibility (PS) -27512 + (NN) -11198 + (LL) 2204
1D Compatibility (HY) -20000 + (ID) 3950
Total energy: -198801.0 ( -94.67 by residue)
QMean score : 0.545
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