Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISSYHRPTRALIDLEAIANNVKSVQEHIPSDKKTFAVVKANAYGHGAVEVSK-YIESIVDGFCVSNLDEAIELRQAGIVKMILVLGVVMPEQVILAKNENITLTVASLEWLRLCQTSAVDLSGLEVHIKVDSGMGRIGVRQLDEGNKLISELGESGASV-KGIFTHFATADEADNCKFNQQLTFFKDFISGLDNCPDLVHASNSATSLWHSETIFNAVRLGVVMYGLNPSGTDLDLPYPINPALSLESELVHVKQLHDGSQVGYGATYQVTGDEFVGTVPIGYADGWTRDMQGFSVIVNGELCEIIGRVSMDQMTIRLPQKYTIGTKVTLIGQQGSCNITTTDVAQKRQTINYEVLCLLSDRIPRYY |
| 4ILS Chain:A ((2-368)) | --NDFHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMASVCGNAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVTGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPIHFHLYMDTGMG---VKDEEETKRIVALIERHPHFVLEGLWTWF------------YQYTRFLHMLEWLPSRPPLVFCAN---SLR---RTFNMVQFGIAMYGLA---------YPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYKDGWLRRLQHFHVLVDGQKAPIVGRILMDMCMIRLPGPLPVGTKVTLIGRQGDKVISIDDVARHLETINYEVPCTISYRVPRIF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ILS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -261197 for 2710 contacts (-96.4/contact) +
2D Compatibility (PS) -35855 + (NN) -7183 + (LL) 1132
1D Compatibility (HY) -27600 + (ID) 7150
Total energy: -337853.0 ( -124.67 by residue)
QMean score : 0.543
|
|
|