Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGKVNFHDIEILSDDKGAPLITKEPFNGKSFVSISHSGNYAQASVILEEEK
4JM7 Chain:A ((25-140))
MIHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALG-----VAFNDIDCYND--GKPKIDYEGF--IVHVSISHTEHYAMSQVVLEKS-
General information:
TITO was launched using:
RESULT:
Template:
4JM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52606 for 769 contacts (-68.4/contact) +
2D Compatibility (PS) -11606 + (NN) -4756 + (LL) -184
1D Compatibility (HY) -10000 + (ID) 2500
Total energy: -81652.0 ( -106.18 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_4JM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JM7-query.scw
PDB file :
Tito_Scwrl_4JM7.pdb
: