Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEQRLTRCQTAISQLSCDALLITNLTNIFYLTGFS----GTNATVLI--SPKHRIFVTDSRYALIAKNTVREFDIII---SREPLAAILKIIRDDALMA--IGFETDISYHMYKHMVEVFEDYRLIEAPSVVEKLRMIKDATELAIIRQACRISDQAFLDVL--DFIKPDRTTELQVANFLDFRMRELGATGPSFDFIVASGYRSAMPHGVASQKTIQSGEALTLDFGCYYQHYVSDMTRTIHIGHVTDQEREIYDIVLKSNQAIIDNVKSGMKRCDYDYLARQVIENSGYGNHFTHGIGHGMGLDVHEIPYFGK-SEGVIASGMVVTDEPGIYLDNKYGVRIEDDLLITETGCEVLTSAPKELIVL |
| 2HOW Chain:A ((2-356)) | -----RLEKFIHLLGERGFDGALISPGTNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLY----ENVVNNFPATFWHDGENPYAKLREILEELGISKGRILIEDTMRADWLIGIMKLGK-FTFQPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIG---MKERELALKIELLIREL-SDGIAFEPIVASGENAANPHHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFIHRTGHGLGLDVHEEPYIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEGKGRRLTKAERELIIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240633 for 2884 contacts (-83.4/contact) +
2D Compatibility (PS) -37001 + (NN) -13190 + (LL) 696
1D Compatibility (HY) -27200 + (ID) 6050
Total energy: -323378.0 ( -112.13 by residue)
QMean score : 0.491
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