Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYNQVVGPNNKHNAVSVKVALHNQAIFLLLQDGFEPEKIVIDAFTSSKNYQNYLKNEKNQFKQTITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGISSLEHCAKLHFANTKKAQALLK |
| 4PY5 Chain:A ((32-266)) | ---------------------------------YRLRLNDAILTVYKSGSVVYGGKGREKLKELVA-----ETVLSDTE-LPRIGCNEAGKGEFVGPLVVACIVADEKCLKRLIELGVKDSKKLSNEKVEELASEITETCHGKVKLLIPEKYNRAY---SKFKNINRLLEAVYREIVSDLCEKFSPKVVVVDKF--SNRAEEVLKDVVKGAR--LEVRPKAEDD-LAVAAASIVAKAVRLKTMKELEKRFKVKLPEG-----NTGLAELLKKTPKELHEKLFKLHFSV--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92514 for 1909 contacts (-48.5/contact) +
2D Compatibility (PS) -25674 + (NN) -13672 + (LL) 4016
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -146944.0 ( -76.97 by residue)
QMean score : 0.487
|
|
|