Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKKRYSKNSHNLITLLGIVVLASLISDFWSEVIATLLIIGGGYCAYYVYDKKRLKRFTSNQRIEALKSDIKETDQDIRHLEILKKDNRSKEYIKLAHQILPQLDLIRNEANQLQKAIEPNIYKRITKKANTFSNEINEQLIKLHASPELEPISDQEDEMIRIAPELKPFYHNIQDDHFAILKKIEEADNKAELAAIHQANMKRFTDVLAGYIRIKQSPKNFNNAKERLEQALQAIKKFNLDLDETLRQLNESDMKDFDVSLRMMQDERNSK |
3MI6 Chain:A ((104-164)) | ------------------------------------------------TYDHYQL--LTGKQRLANLPSTFDDTDDDAQTLVVSFNDRITGLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNRALSSQLDLPDANYDLIQFSGTWARERHLYRHPLRPGMQSISSLRMASSHQQNPFMMLARPQTTDEQGAVFGFNLVYSGNFLDAIEVDQYSTSRILTGINPDEFGWNLAPQATFQTPEAILSYTSAGMNQLSQQMASFYQQHLVNPRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15812 for 337 contacts (46.9/contact) +
2D Compatibility (PS) -6215 + (NN) 2148 + (LL) 4220
1D Compatibility (HY) -3600 + (ID) 950
Total energy: 11415.0 ( 33.87 by residue)
QMean score : 0.047
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