Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLVGKEIIEFSAQAYHDGKFITVTNEDVKGKWAVFCFYPADFSFVCPTELGDLQEQYETLKSLDVEVYSVSTDTHFVHKAWHDDSDVVGTITYPMIGDPSHLISQGFDVLGQD-GLAQRGTFIIDPDGVIQMMEINADGIGRDASTLIDKVRAAQYIRQHPGEVCPAKWKEGAETLTPSLDLVGKI
1YEX Chain:A ((1-167))
-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFDHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPA-------------------
General information:
TITO was launched using:
RESULT:
Template:
1YEX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91646 for 1258 contacts (-72.9/contact) +
2D Compatibility (PS) -18458 + (NN) -11020 + (LL) 1348
1D Compatibility (HY) -18400 + (ID) 4800
Total energy: -142976.0 ( -113.65 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1YEX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YEX-query.scw
PDB file :
Tito_Scwrl_1YEX.pdb
: