Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITPKENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQWVGERVGLYFLEDSFACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISPKNAKILFSQFATFADICFGIEPLMVDSQDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETVTAVNKVLNQSKDIIR |
| 1V1B Chain:A ((1-258)) | MLEVVTAGEPLVALVPQEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLY-LREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYL-EGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLF-----LSEEEAELLFGRVEEALRALSAPEVVL------------KR-----GAKGAWAFVDGRRVE--GSAFAVEAVDP-VGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYREDLEVLL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86887 for 2160 contacts (-40.2/contact) +
2D Compatibility (PS) -27207 + (NN) -1975 + (LL) 3140
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -134479.0 ( -62.26 by residue)
QMean score : 0.485
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