Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDVLIIEDDPMVEFIHRNYLEKLNYFQNIYSTASQTQAIAYLNDIKIQLVLLDIHIKEGNGLELLKLLRNQHQNTEVIVISAANEAHTVKEAFHLGIVDYLIKPFTFERFESSIEKFLNHYHTFEADKIYQDNIDHFQKIDSGWLEGEVKLDEKGLSEITYQHILDAIQELEQPFTIQELAKCSQFSHVSVRKYIAYMEEKGLLTSQQIYTKVGRPYKVYKLIKKT
1PEY Chain:A ((6-119))
--ILIVDDQSGIRILLNEVFNKEGY--QTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPL----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107320 for 876 contacts (-122.5/contact) +
2D Compatibility (PS) -12310 + (NN) -6213 + (LL) 8808
1D Compatibility (HY) -11200 + (ID) 1550
Total energy: -129785.0 ( -148.16 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1PEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PEY-query.scw
PDB file :
Tito_Scwrl_1PEY.pdb
: