Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQQYFVNGEAGAYVTIEDKDTIKHMFNVMRLTEDDQVVLVFDDAIKRLAKVVD-SSAHRFQILEELDNNVEMPVQVTIASGFPKGDKLDFVTQKATELGAAAIWGFPADWSVVKWDGKKLAKKEDKLAKIALGAAEQSKRNRLPQVRLFEKKADFQAELAGFDKIFIAYEESAKEG---ELSALAQNLQTVKAGDKLLFIFGPEGGISPKEIAAFEEVGAIKVGLGPRIMRTETAPLYALSVISYSAELL |
1V6Z Chain:A ((21-213)) | ----------------------RHLVEVLRARVGDRFT-VFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEMGEG---KLRRLRAVALEAAKQSGRVVVPEV---------------LPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16820 for 1301 contacts (12.9/contact) +
2D Compatibility (PS) -19770 + (NN) -769 + (LL) 3612
1D Compatibility (HY) 800 + (ID) 2100
Total energy: -1407.0 ( -1.08 by residue)
QMean score : 0.214
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