Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMVLERERFMTESDIKVIKRDGRLVSFDKYKIYTALLKASNKVIKMSPLVEAKLEMIADHVIAEIYNRFKDNIKIYEIQNIVEHKLLEANEYAIAQEYINYRTQRDFERSQATDINFSIGKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFK-IGNAEVESPKSIQTATAQISQIIANVASSQYGGCTADRIDEFLAPYAQLNYQKHLKDAKEWVIEDKQEDYARAKTQKDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTNWF------EREIQKAILKIRIQGLGS-------------EHRTAIFPKLIFTL--KKGLNLEEDSPNYDIKQLALECATKRMYPDVLSYDKIIDLTGSFKAPMGCRSFLQGWRDANGQDVTSGRMN-----------LGVVTVNLPRVAMESNGDMDKFWEIFNERMSIARDALVYRVERVKEAIPANAPILYQYGAFGERLGKYDNVDRLFNHRRATVSLGYIGLYEVASVFYGGDWED------NHQAKAFTVDIVRKMKQLCADWSDEYDYHFSVYSTPSESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKNPTPFEKLDFEKIYPETGASGGFIHYCEYPVLQQNPKALEAVWDYAYDRVGYLGTNTPIDKCYQCQ-FEGDFTPTDRGFTCPNCGNSDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVKHMNGSSIKNQGN |
| 4COI Chain:A ((96-623)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------KGVADEFVEAQINGAVYLHDRHHAALMPY--CFAYTLKPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVM-FASNQSSGAVG------LPDFFVWMWYFVKKDLKEGIIPRDKLDWY-------IEQHFQILTYSLNQPIRTT-QSPYTNFTY-LDRNYIKAIFEGERYPDGSLITDHVEDIIALQKHYWEWVSRERERQMFTFPVLTASLLYKDGKFLDEDSARF-INKINMKWQDTNWYIS----DSIDAVASCCR------------------EKLKGRMNSIGGSDLNIGSFKVITVNLPRIALESGGDREKYLQILRHRVQLIKKALAAVREIIKERISEGLLPLYENGLM------------LLNRQYGTI--GVTGVWESASIM-GLTTEDIDGLKYTEEGEVFVDNVLDTIREEAEKGYHEYGFTFNIEQVPAEKAAVTLAQKDRFLFG---EKQPFEIYSNQW-VPLMANTDVLNRIRYSGKWDKKVSGGAILHINLGESFKTEEESFNMVKMIADMGVMYFAFNTKISVCEDGHAFYGE--------RCPVCGKAK---VDEYMRIVGYLVPVSAFNKERREIEYP----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4COI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160145 for 3737 contacts (-42.9/contact) +
2D Compatibility (PS) -50006 + (NN) -13109 + (LL) 16028
1D Compatibility (HY) -30800 + (ID) 6300
Total energy: -244332.0 ( -65.38 by residue)
QMean score : 0.351
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