Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTKHLIASEIQKVVPDMEQSTILSLLETP-KNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSDQ-FEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAETDPSVDEEAREWFRKLEANDPEATELWQWFRDESLLEFNRLYDQMNVTFDSYNGEAFYNDKMDEVLELLESKNLLVESKGAQVVNLEKYGIEHPALIKKSDGATLYITRDLAAALYRKRTYDFAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSD----DMTHVPFGLVT-KGGAKLSTRKGNVILLEPTVAEAINRAASQIEAKNPNLADKDKVAQA---------VGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKANFN------PSNSDNYSLNDVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYAHTRILDEDAEISS-------RLALCYATATVLKESLRLLGVDAPNEM |
4Q2Y Chain:A ((28-607)) | ---QEVFGH----AYPDLENP---PLLVTPSQ---FGDYQCNSAMGISQM-----------ITKHLPDNEC-----IAGPGFINVHLRKDFVSEQ-LTSLLVNGVQLPA--LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIE-RGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVFVP--GCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMI--GWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEK-----ERDKVLTAEELNAAQTSVAYGCIKYADLSRNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDR---KILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239038 for 4002 contacts (-59.7/contact) +
2D Compatibility (PS) -54805 + (NN) -20138 + (LL) 3276
1D Compatibility (HY) -42000 + (ID) 8400
Total energy: -361105.0 ( -90.23 by residue)
QMean score : 0.509
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