Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTDKGLQV-YGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKI--PSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGMPA------------QGKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN |
| 3QO6 Chain:A ((10-330)) | -----------------------------------------------------------KKLQTDELATVRLFQENTPSVV--YITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQG---HIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIP-VGVSADLLVGQKVFAIGNPFGLDH--TLTTGVISGLRREIS-SAATGRPIQ-DVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSP-----SGASS-----GVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFA-----PDQSVEQLGV-----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106959 for 2451 contacts (-43.6/contact) +
2D Compatibility (PS) -33104 + (NN) -11453 + (LL) 4676
1D Compatibility (HY) -26000 + (ID) 5950
Total energy: -178790.0 ( -72.95 by residue)
QMean score : 0.470
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