Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQTKKDQPKGNLAWWQLSLIGVGCTIGTGFFLGSSIAIVKSGFSVLLSFLIAGIGTYFVFEQLAKLSAKQPEKGSFCAYARKAFGKWAGFSNGWVYWTSEMLITGSQLTAISLFTKHWFPQVPLWVFASIYAVLGLLIIFTGLSVFEKTENVLAVIKTAAIFMFIVIAILALCGILSGGNHGIHVPNKTSEFFPYGAMGLWTGLIYAFYAFGGIEVMGLMAVHLKKPEEA---SKSGKLMLATLAIIYIISIGLALLLVPLHTFTEQDSPFITSLKGYNLEIILDIFNGIFIIAGFSTLVASLFAVTTLLC----TMADDGDAPKCFTLKEGKKICWPALGLTFAGLVLSII-LSLVLPKNIYEHMTTAAGLMLLYTWLFILFSSKKLTDPEGMGKTQIYLAMVLIAAAVSGTLFEKSSRPGFFVSIGFLVIIAIVTMIYQKKQGHKDRPASP
3LRC Chain:A ((15-349))-----------------VTLMVSGNIMGSGVFLLPA-NLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVV-VLWIFVLLNIVGP-KMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGA--IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIA--AVCYVLSTTAIMGMIPN------------------------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIF--ARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKE-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1510 -224761 -148.85 -732.12
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -148.85
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_3LRC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LRC-query.scw
PDB file : Tito_Scwrl_3LRC.pdb: