Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEHQTLRGIQQEIKSEIEIAANVQQTLLGTKVPQEEALDIGAISVPAKQMSGDYY-HFVKDKESINIAIADVIGKGIPAALCMSMIKYAM----------DSLPETGIHPSQVLKNLNRVVEQNVDASMFITMFYANYNMDKHQFTYASAGHEPGFYYSQKDNTFYDLEAKGLVLGISQDYDYKQFDQHLEKGDMIVLFSDGVTECRTENGFLERPDLQKLIEEHMCSSAQEM--VKNIYDSLLKLQDFQLHDDFTLIVLRRKV
3EQ2 Chain:A ((175-390))-----------------------------------------------------------------------------------------------------------------------EGLEFSHRII-----SGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPE--FKPSEVLAHINRGL-INTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGY-LEGR--PVGLFDDA--DDRVMELPPSFSLSLFSDGILD-----TLKEK---EASLPEQVAAAG--LDGLRQVF-GLANLA--E--DDIALLVLS---


General information:
TITO was launched using:
RESULT:

Template: 3EQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 906 -106315 -117.34 -574.67
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -117.34
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.375

(partial model without unconserved sides chains):
PDB file : Tito_3EQ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EQ2-query.scw
PDB file : Tito_Scwrl_3EQ2.pdb: